Plant GARDEN
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TOP > About the Species(Nicotiana tabacum var. TN90) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Nicotiana tabacum

CDS Sequence

CDS ID

lcl|NW_015810361.1_cds_XP_016496168.1_10418
CDS Infomation

[gene=LOC107815168] [db_xref=GeneID:107815168] [protein=premnaspirodiene oxygenase-like] [protein_id=XP_016496168.1] [location=complement(join(9161..9781,13265..14119))] [gbkey=CDS]
Sequence

ATGGAGTTTCAGGTTCCATTCAACTTTATTTTCATATTCCTTTTCCGGTCATTCCTCTTT
CTACTAGTAGGGGAATGGAAGAAATCAAAAACCTTAAACAAGAAACTGCCTCCTGGTCCA
TGGAAATTGCCTATTTTAGGAAGTGTCCATCACTTGGCATTAGAAGGTGGACTTCCCCAC
CATGCACTTGCAAACTTGGCCAAAAAATATGGACCTGATCTCATGCACCTTCAACTAGGT
GAAATTTCTACAGTCGTGGTTTCTTCTCTTGACATGGCGCGAGAGGTACTAAAAACTCAT
GACCTCGCTTTTGTATCGAGGCCTAAACTATTGTCCCTCGAGATAATTTGTGTCTTGGAA
CTACTCTGTGCAAAGAGCGTTCGCTCCTTTAGTTCTATTAGGCGCGACGAGTCTTCTCGT
CTAGTGCAACATATCCAGTCATCAACACCCAACGAGTCAATAAACATTACCAAAAGGATA
TCATGGTATGAGAGCTCCATCACTTGCAAAACAGCATTTGGAGAATTGTTGAAAGACCAA
GAAAAATTCAAATTCATTGAAGTAGTAAACGAAGTGTTAGCCTTAGCAGGTGGCTTTAGT
GTAGCTGACATTTTCCCTTCAATCAAGATCCTTCATTTGCTAAGTGGAATGAGGGGTAGA
ATTTTGAGTACTCACAAAAGAGTAGATGCTATTGTTGAGGATGTTATGAATGAGCATAAA
AAGAATCTTGCAAGTGGTAAAACAGGCAATGGTGCATTAGGAGGTGAAGATCTAGTTGAT
GTTCTACTAAGACTAAAGGAGAGTGGAGAACTTCAAATCCCAATCATCAATGACAACATC
AAAGCAGTTATGATTGACATGCTTACTGGGGGAACAGAAACTTCAACATCATCAACAATA
TGGGCGATGACAGAAATGATGAGGAACCCAAGGGTGTTTGCAAAGGCACAAGCTGAGATA
AGAGAAGCATTCAAAGGAAAAGAAACATTCGATGAGGACGAGATTGAGGAGTTGAAATAC
CTAAAACAGGTTGTTAAAGAAACCTTGAGACTTCATCCTCCACTCCCTCTCTTGGTTCCA
AGAGAGTGTAGGGAAGAAACAAACATCAATGGATACACTATCCCATTAAAAACAAGAGTC
ATGGTTAATGTTTGGGCAATAGGAAAGGATCCAAAGTATTGGGAAGACGCAGAAGAATTT
AAGCCGGAGAGATTTGAGCAGAGCTCTGTGGATTTCATGGGGAATAACTTTGAGTATCTT
TCTTTTGGTGTCGGAAGGAGAATGTGTCCTGGAATTTCATTTGGTTTAATAAATGTTCAC
CTTCCAATAGCTAAATTGCTCTATCATTTTGACTGGAAACTCCCTGATGGTGTCAAACCT
GAGGATTTGGACATGACGGAATTTACTGCAATAACTGCAGCAAGGAAGAGTGAACTTCAC
TTAATTGCCACTCCTTATTATCCTTCTCAGGAATGA

Peptide Sequence

PEP ID

XP_016496168.1
PEP Infomation

PREDICTED: premnaspirodiene oxygenase-like [Nicotiana tabacum]
Sequence

MEFQVPFNFIFIFLFRSFLFLLVGEWKKSKTLNKKLPPGPWKLPILGSVHHLALEGGLPH
HALANLAKKYGPDLMHLQLGEISTVVVSSLDMAREVLKTHDLAFVSRPKLLSLEIICVLE
LLCAKSVRSFSSIRRDESSRLVQHIQSSTPNESINITKRISWYESSITCKTAFGELLKDQ
EKFKFIEVVNEVLALAGGFSVADIFPSIKILHLLSGMRGRILSTHKRVDAIVEDVMNEHK
KNLASGKTGNGALGGEDLVDVLLRLKESGELQIPIINDNIKAVMIDMLTGGTETSTSSTI
WAMTEMMRNPRVFAKAQAEIREAFKGKETFDEDEIEELKYLKQVVKETLRLHPPLPLLVP
RECREETNINGYTIPLKTRVMVNVWAIGKDPKYWEDAEEFKPERFEQSSVDFMGNNFEYL
SFGVGRRMCPGISFGLINVHLPIAKLLYHFDWKLPDGVKPEDLDMTEFTAITAARKSELH
LIATPYYPSQE

Transcript Sequence

Gene sequence data has not been registered.